HMM Summary Page: TIGR01841
Accession | TIGR01841 |
Name | phasin |
Function | phasin family protein |
Trusted Cutoff | 30.20 |
Domain Trusted Cutoff | 30.20 |
Noise Cutoff | 27.25 |
Domain Noise Cutoff | 27.25 |
Isology Type | subfamily_domain |
HMM Length | 88 |
Author | Haft DH |
Entry Date | Feb 28 2003 4:18PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM describes a family of small proteins found associated with inclusions in bacterial cells. Most associate with polyhydroxyalkanoate (PHA) inclusions, the most common of which consist of polyhydroxybutyrate (PHB). These are designated granule-associate proteins or phasins; the member from Rhodospirillum rubrum is an activator of polyhydroxybutyrate (PHB) degradation. However, the member from Magnetospirillum sp. AMB-1 is called a magnetic particle membrane-specific GTPase. |
References | RN [1] RM 15060050 RT Unraveling the function of the Rhodospirillum rubrum activator of polyhydroxybutyrate (PHB) degradation: the activator is a PHB-granule-bound protein (phasin). RA Handrick R, Reinhardt S, Schultheiss D, Reichart T, Schuler D, Jendrossek V, Jendrossek D. RL J Bacteriol. 2004 Apr;186(8):2466-75. RN [2] RM 11557762 RT A magnetosome-specific GTPase from the magnetic bacterium Magnetospirillum magneticum AMB-1. RA Okamura Y, Takeyama H, Matsunaga T. RL J Biol Chem 2001 Dec 21;276(51):48183-8 |
Genome Property | GenProp0055: polyhydroxyalkanoic acids (HMM) |