HMM Summary Page: TIGR01715

Functionphage tail assembly protein T
Trusted Cutoff77.35
Domain Trusted Cutoff77.35
Noise Cutoff53.85
Domain Noise Cutoff53.85
Isology Typeequivalog
HMM Length111
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateOct 4 2002 11:48AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents a translation of the T gene in phage lambda and related phage. A translational frameshift from the upstream gene G into the frame of T produces a minor protein gpG-T, essential in tail assembly but not found in the mature virion.
ReferencesRM 8230192 RT A programmed translational frameshift is required for the synthesis of a bacteriophage lambda tail assembly protein. RA Levin ME, Hendrix RW, Casjens SR. RL J Mol Biol 1993 Nov 5;234(1):124-39
Genome PropertyGenProp0208: phage: major features (HMM)