Accession | TIGR01714 |
Name | phage_rep_org_N |
Function | phage replisome organizer, putative, N-terminal region |
Trusted Cutoff | 49.80 |
Domain Trusted Cutoff | 49.80 |
Noise Cutoff | 49.50 |
Domain Noise Cutoff | 49.50 |
Isology Type | hypoth_equivalog_domain |
HMM Length | 119 |
Mainrole Category | Mobile and extrachromosomal element functions |
Subrole Category | Prophage functions |
Author | Haft DH |
Entry Date | Oct 3 2002 4:01PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM represents the N-terminal domain of a small family of phage proteins. The protein contains a region of low-complexity sequence that reflects DNA direct repeats able to function as an origin of phage replication. The region covered by this model is N-terminal to the low-complexity region. |
References | RM 10223975
RT Molecular characterization of a phage-encoded resistance system in Lactococcus lactis.
RA McGrath S, Seegers JF, Fitzgerald GF, van Sinderen D.
RL Appl Environ Microbiol 1999 May;65(5):1891-9 |