HMM Summary Page: TIGR01711

Functiontype II secretion system protein J
Gene SymbolgspJ
Trusted Cutoff64.85
Domain Trusted Cutoff64.85
Noise Cutoff29.65
Domain Noise Cutoff29.65
Isology Typeequivalog
HMM Length192
Gene Ontology TermGO:0008565: protein transporter activity molecular_function
GO:0015627: type II protein secretion system complex cellular_component
GO:0015628: protein secretion by the type II secretion system biological_process
AuthorHaft DH
Entry DateOct 1 2002 3:31PM
Last ModifiedFeb 17 2012 10:32AM
CommentThis HMM represents GspJ, one of two proteins highly conserved at their N-termini and described by PF02501 but easily separable phylogenetically. The other is GspI. Both GspI and GspJ are proteins of the type II secretion pathway, or main terminal branch of the general secretion pathway. This pathway carries proteins across the outer membrane. Note that proteins of type II secretion are cryptic in E. coli K-12 - present but not yet demonstrated to act on any target.
Genome PropertyGenProp0053: type II secretion (HMM)