Accession | TIGR01690 |
Name | ICE_RAQPRD |
Function | integrative conjugative element protein, RAQPRD family |
Trusted Cutoff | 60.85 |
Domain Trusted Cutoff | 60.85 |
Noise Cutoff | 24.00 |
Domain Noise Cutoff | 24.00 |
Isology Type | hypoth_equivalog |
HMM Length | 96 |
Mainrole Category | Mobile and extrachromosomal element functions |
Subrole Category | Plasmid functions |
Author | Haft DH |
Entry Date | Sep 20 2002 4:19PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM represents a small family of proteins about 100 amino acids in length, including a predicted signal sequence and a perfectly conserved motif RAQPRD towards the C-terminus. Members are found in the Pseudomonas putida TOL plasmid pWW0 and in cryptic plasmid regions of Salmonella enterica subsp. enterica serovar Typhi and Pseudomonas syringae DC3000. The function is unknown. |
Genome Property | GenProp0855: integrating conjugative element, PFGI-1 class (HMM) |