HMM Summary Page: TIGR01673

Functionphage holin, LL-H family
Trusted Cutoff34.75
Domain Trusted Cutoff34.75
Noise Cutoff34.65
Domain Noise Cutoff34.65
Isology Typeequivalog
HMM Length108
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateSep 11 2002 1:28PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents a putative phage holin from a number of phage and prophage regions of Gram-positive bacteria. Like other holins, it is small (about 100 amino acids) with stretches of hydrophobic sequence and is encoded adjacent to lytic enzymes.
Genome PropertyGenProp0208: phage: major features (HMM)