HMM Summary Page: TIGR01636

Functionphage transcriptional regulator, RinA family
Trusted Cutoff31.90
Domain Trusted Cutoff31.90
Noise Cutoff31.80
Domain Noise Cutoff31.80
Isology Typesubfamily
HMM Length134
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
Gene Ontology TermGO:0003700: sequence-specific DNA binding transcription factor activity molecular_function
GO:0045449: regulation of transcription biological_process
AuthorHaft DH
Entry DateAug 19 2002 1:52PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents a family of phage proteins, including RinA, a transcriptional activator in staphylococcal phage phi 11. This family shows similarity to ArpU, a phage-related putative autolysin regulator, and to some sporulation-specific sigma factors.
ReferencesRM 8432703 RT Cloning, sequencing, and genetic characterization of regulatory genes, rinA and rinB, required for the activation of staphylococcal phage phi 11 int expression. RA Ye ZH, Lee CY. RL J Bacteriol 1993 Feb;175(4):1095-102