| Accession | TIGR01630 |
| Name | psiM2_ORF9 |
| Function | phage uncharacterized protein, C-terminal domain |
| Trusted Cutoff | 41.65 |
| Domain Trusted Cutoff | 41.65 |
| Noise Cutoff | 27.85 |
| Domain Noise Cutoff | 27.85 |
| Isology Type | hypoth_equivalog |
| HMM Length | 142 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Prophage functions |
| Author | Haft DH, Fouts DE |
| Entry Date | Aug 12 2002 4:00PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM represents the C-terminal region of a set of phage proteins typically about 400-500 amino acids in length, although some members are considerably shorter. An article on Methanobacterium phage Psi-M2 (PMID:9791169) calls the member from that phage, ORF9, a putative large terminase subunit, and ORF8 a candidate terminase small subunit. Most proteins in this family have an apparent P-loop nucleotide-binding sequence toward the N-terminus. |
| References | RM 9791169
RT Molecular analysis of Methanobacterium phage psiM2.
RA Pfister P, Wasserfallen A, Stettler R, Leisinger T.
RL Mol Microbiol 1998 Oct;30(2):233-44 |
| Genome Property | GenProp0208: phage: major features (HMM) |
