HMM Summary Page: TIGR01592

Functionholin, SPP1 family
Gene SymbolxhlB
Trusted Cutoff47.30
Domain Trusted Cutoff47.30
Noise Cutoff28.25
Domain Noise Cutoff28.25
Isology Typeequivalog
HMM Length78
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH, Fouts D
Entry DateJul 18 2002 11:37PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents one of more than 30 families of phage proteins, all lacking detectable homology with each other, known or believed to act as holins. Holins act in cell lysis by bacteriophage. Members of this family are found in phage PBSX and phage SPP1, among others.
Genome PropertyGenProp0208: phage: major features (HMM)