HMM Summary Page: TIGR01564

FunctionS-layer protein
Trusted Cutoff25.00
Domain Trusted Cutoff25.00
Noise Cutoff20.00
Domain Noise Cutoff20.00
Isology Typesubfamily
HMM Length571
Mainrole CategoryCell envelope
Subrole CategorySurface structures
AuthorHaft DH
Entry DateJun 26 2002 1:08PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents one of several families of proteins associated with the formation of prokaryotic S-layers. Members of this family are found in archaeal species, including Pyrococcus horikoshii (split into two tandem reading frames), Methanococcus jannaschii, and related species. Some local similarity can be found to other S-layer protein families.
ReferencesDR SWISSPROT; Q58232; annotated entry from Methanococcus jannaschii.