HMM Summary Page: TIGR01555

Functionphage-associated protein, HI1409 family
Trusted Cutoff196.25
Domain Trusted Cutoff196.25
Noise Cutoff57.30
Domain Noise Cutoff57.30
Isology Typehypoth_equivalog
HMM Length404
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateJun 17 2002 11:20AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes an uncharacterized family of proteins found in prophage regions of a number of bacterial genomes, including Haemophilus influenzae, Xylella fastidiosa, Salmonella typhi, and Enterococcus faecalis. Distantly related proteins can be found in the prophage-bearing plasmids of Borrelia burgdorferi.
Genome PropertyGenProp0208: phage: major features (HMM)