HMM Summary Page: TIGR01547

Functionphage terminase, large subunit, PBSX family
Trusted Cutoff105.05
Domain Trusted Cutoff105.05
Noise Cutoff50.85
Domain Noise Cutoff50.85
Isology Typeequivalog
HMM Length396
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH, Fouts DE
Entry DateJun 12 2002 11:47AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM detects members of a highly divergent family of the large subunit of phage terminase. All members are encoded by phage genomes or within prophage regions of bacterial genomes. This is a distinct family from PF03354.
Genome PropertyGenProp0208: phage: major features (HMM)