HMM Summary Page: TIGR01477
| Accession | TIGR01477 |
| Name | RIFIN |
| Function | variant surface antigen, rifin family |
| Trusted Cutoff | 176.95 |
| Domain Trusted Cutoff | 176.95 |
| Noise Cutoff | 54.30 |
| Domain Noise Cutoff | 54.30 |
| Isology Type | paralog |
| HMM Length | 356 |
| Author | Haft DH, Berriman M |
| Entry Date | Mar 21 2002 2:22PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM represents the rifin branch of the rifin/stevor family (PF02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits. |