HMM Summary Page: TIGR01310

Function60S ribosomal protein uL30
Trusted Cutoff254.00
Domain Trusted Cutoff254.00
Noise Cutoff92.30
Domain Noise Cutoff92.30
Isology Typesubfamily
HMM Length236
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022625: cytosolic large ribosomal subunit cellular_component
AuthorHaft DH
Entry DateJul 17 2001 4:17PM
Last ModifiedSep 4 2014 12:47PM
CommentThis HMM describes the eukaryotic 60S (cytosolic) ribosomal protein uL30 (previously L7) and paralogs that may or may not also be uL30. Human, Drosophila, and Arabidopsis all have both a typical L7 and an L7-related paralog. This family is designated subfamily rather than equivalog to reflect these uncharacterized paralogs. Members of this family average ~ 250 residues in length, somewhat longer than the archaeal L30P/L7E homolog (~ 155 residues) and much longer than the related bacterial/organellar form (~ 60 residues).