HMM Summary Page: TIGR01053

Functionzinc finger domain, LSD1 subclass
Trusted Cutoff15.50
Domain Trusted Cutoff15.50
Noise Cutoff12.65
Domain Noise Cutoff12.65
Isology Typesubfamily_domain
HMM Length31
AuthorHaft DH, Wu D
Entry DateNov 28 2000 12:37PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes a putative zinc finger domain found in three closely spaced copies in Arabidopsis protein LSD1 and in two copies in other proteins from the same species. The motif resembles CxxCRxxLMYxxGASxVxCxxC
ReferencesRM 97207015 RT A novel zinc finger protein is encoded by the Arabidopsis LSD1 gene and functions as a negative regulator of plant cell death. RA Dietrich RA, Richberg MH, Schmidt R, Dean C, Dangl JL RL Cell 1997 Mar 7;88(5):685-94