| Accession | TIGR01049 |
| Name | rpsJ_bact |
| Function | ribosomal protein uS10 |
| Gene Symbol | rpsJ |
| Trusted Cutoff | 72.75 |
| Domain Trusted Cutoff | 72.75 |
| Noise Cutoff | 70.00 |
| Domain Noise Cutoff | 70.00 |
| Isology Type | equivalog |
| HMM Length | 99 |
| Mainrole Category | Protein synthesis |
| Subrole Category | Ribosomal proteins: synthesis and modification |
| Gene Ontology Term | GO:0000314: organellar small ribosomal subunit cellular_component |
| | GO:0003735: structural constituent of ribosome molecular_function |
| | GO:0006412: translation biological_process |
| | GO:0022627: cytosolic small ribosomal subunit cellular_component |
| Author | Haft DH, Ujwal ML |
| Entry Date | Nov 22 2000 3:21PM |
| Last Modified | Sep 4 2014 10:50AM |
| Comment | This HMM describes bacterial 30S ribosomal protein S10. In species that have a transcription antitermination complex, or N utilization substance, with NusA, NusB, NusG, and NusE, this ribosomal protein is responsible for NusE activity. Included in the family are one member each from Saccharomyces cerevisiae and Schizosaccharomyces pombe. These proteins lack an N-terminal mitochondrial transit peptide but contain additional sequence C-terminal to the ribosomal S10 protein region. |
| References |
DR HAMAP; MF_00508; 534 of 587 |
| Genome Property | GenProp0132: transcription termination - antitermination Nus factors (HMM) |
| | GenProp0175: ribosome, bacterial, small subunit (HMM) |
| | GenProp0799: bacterial core gene set, exactly 1 per genome (HMM) |
