Accession | TIGR01021 |
Name | rpsE_bact |
Function | ribosomal protein uS5 |
Gene Symbol | rpsE |
Trusted Cutoff | 164.05 |
Domain Trusted Cutoff | 164.05 |
Noise Cutoff | 119.35 |
Domain Noise Cutoff | 119.35 |
Isology Type | equivalog |
HMM Length | 156 |
Mainrole Category | Protein synthesis |
Subrole Category | Ribosomal proteins: synthesis and modification |
Gene Ontology Term | GO:0000312: plastid small ribosomal subunit cellular_component |
| GO:0003735: structural constituent of ribosome molecular_function |
| GO:0006412: translation biological_process |
| GO:0022627: cytosolic small ribosomal subunit cellular_component |
Author | Durkin S, Haft DH |
Entry Date | Nov 7 2000 1:40PM |
Last Modified | Sep 4 2014 10:50AM |
Comment | This model finds chloroplast ribosomal protein S5 as well as bacterial ribosomal protein S5. A candidate mitochondrial form (Saccharomyces cerevisiae YBR251W and its homolog) differs substantially and is not included in this model. |
References | DR EXPERIMENTAL; EGAD|12973|EC3303; Eschericia coli
DR OUTGROUP; EGAD|44645|MJ0475; archaeal
DR HAMAP; MF_01307; 519 of 571 |
Genome Property | GenProp0175: ribosome, bacterial, small subunit (HMM) |
| GenProp0799: bacterial core gene set, exactly 1 per genome (HMM) |