HMM Summary Page: TIGR01017

Functionribosomal protein uS4
Gene SymbolrpsD
Trusted Cutoff177.20
Domain Trusted Cutoff177.20
Noise Cutoff66.80
Domain Noise Cutoff66.80
Isology Typeequivalog
HMM Length200
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0000314: organellar small ribosomal subunit cellular_component
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022627: cytosolic small ribosomal subunit cellular_component
AuthorDurkin S, Haft DH
Entry DateNov 6 2000 11:45AM
Last ModifiedSep 4 2014 10:50AM
CommentThis model finds organelle (chloroplast and mitochondrial) ribosomal protein S4 as well as bacterial ribosomal protein S4.
ReferencesDR EXPERIMENTAL; EGAD|13606|EC3296; Eschericia coli DR HAMAP; MF_01306; 775 of 834
Genome PropertyGenProp0175: ribosome, bacterial, small subunit (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)