HMM Summary Page: TIGR00912

Functionspore germination protein (amino acid permease)
Trusted Cutoff139.55
Domain Trusted Cutoff139.55
Noise Cutoff102.75
Domain Noise Cutoff102.75
Isology Typesubfamily
HMM Length357
Mainrole CategoryTransport and binding proteins
Subrole CategoryAmino acids, peptides and amines
AuthorLoftus BJ
Entry DateSep 12 2000 3:16PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes spore germination protein GerKB and paralogs from Bacillus subtilis, Clostridium tetani, and other known or predicted endospore-forming members of the Firmicutes (low-GC Gram positive bacteria). Members show some similarity to amino acid permeases.
Genome PropertyGenProp0610: endospore formation marker gene set (HMM)