HMM Summary Page: TIGR00789

FunctionFlhB domain protein
Trusted Cutoff117.35
Domain Trusted Cutoff117.35
Noise Cutoff79.00
Domain Noise Cutoff79.00
Isology Typehypoth_equivalog_domain
HMM Length84
Mainrole CategoryUnknown function
Subrole CategoryGeneral
AuthorHaft DH, Dodson RJ
Entry DateJul 7 2000 1:40PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
ReferencesA2 hmmalign AL clustalw