HMM Summary Page: TIGR00766

Functioninner membrane protein YhjD
Gene SymbolyhjD
Trusted Cutoff213.65
Domain Trusted Cutoff213.65
Noise Cutoff63.00
Domain Noise Cutoff63.00
Isology Typeequivalog
HMM Length263
Mainrole CategoryTranscription
Subrole CategoryDegradation of RNA
AuthorHaft DH
Entry DateJun 13 2000 5:57PM
Last ModifiedDec 8 2011 11:37AM
CommentThis family, including YhjD in E. coli, is a conserved inner membrane protein homologous YihY, which in turn was incorrectly assigned to be ribonuclease BN. This, any suggestion this family is similar to ribonucleases should be removed.
ReferencesRN [1] RM PMID:21556145 RT Ribosome-dependent ATPase interacts with conserved membrane protein in Escherichia coli to modulate protein synthesis and oxidative phosphorylation. RA Babu M, Aoki H, Chowdhury WQ, Gagarinova A, Graham C, Phanse S, Laliberte B, Sunba N, Jessulat M, Golshani A, Emili A, Greenblatt JF, Ganoza MC RL PLoS One. 2011 Apr 27;6(4):e18510. RN [2] RM PMID:15764599 RT The RNase Z homologue encoded by Escherichia coli elaC gene is RNase BN. RA Ezraty B, Dahlgren B, Deutscher MP RL J Biol Chem. 2005 Apr 29;280(17):16542-5.