HMM Summary Page: TIGR00736

Functionputative TIM-barrel protein
Trusted Cutoff218.70
Domain Trusted Cutoff218.70
Noise Cutoff57.65
Domain Noise Cutoff57.65
Isology Typehypoth_equivalog
HMM Length231
Mainrole CategoryUnknown function
Subrole CategoryGeneral
AuthorHaft DH
Entry DateFeb 22 2000 11:32AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family show a distant relationship by PSI-BLAST to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. At least two closely related but well-separable families among the bacteria, the nifR3/yhdG family and the yjbN family, share a more distant relationship to this family of shorter, exclusively archaeal proteins.
ReferencesA2 hmmalign AL clustalw