HMM Summary Page: TIGR00622

Functiontranscription factor ssl1
Trusted Cutoff45.10
Domain Trusted Cutoff45.10
Noise Cutoff35.45
Domain Noise Cutoff35.45
Isology Typesubfamily
HMM Length112
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
AuthorLoftus BJ, Eisen JA
Entry DateOct 20 1999 11:57AM
Last ModifiedFeb 14 2011 3:27PM
CommentAll proteins in this family for which functions are known are components of the TFIIH complex which is involved in the initiaiton of transcription and nucleotide excision repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
ReferencesA2 hmmalign GA hmmsearch DR EGAD; 41398; RM 94040711; RM 94252326;