HMM Summary Page: TIGR00621

Functionsingle-stranded DNA-binding protein
Gene Symbolssb
Trusted Cutoff53.95
Domain Trusted Cutoff53.95
Noise Cutoff51.50
Domain Noise Cutoff51.50
Isology Typesubfamily
HMM Length166
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
Gene Ontology TermGO:0003697: single-stranded DNA binding molecular_function
GO:0006260: DNA replication biological_process
GO:0006281: DNA repair biological_process
GO:0006310: DNA recombination biological_process
GO:0006350: transcription biological_process
AuthorLoftus BJ, Eisen JA
Entry DateOct 20 1999 11:56AM
Last ModifiedApr 28 2011 12:23PM
CommentAll proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins.
ReferencesDR SWISSPROT; P02339; RM 82037821;
Genome PropertyGenProp0800: bacterial core gene set, 1 or more per genome (HMM)