HMM Summary Page: TIGR00598

FunctionDNA repair protein
Trusted Cutoff113.15
Domain Trusted Cutoff113.15
Noise Cutoff66.65
Domain Noise Cutoff66.65
Isology Typeequivalog
HMM Length171
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
Gene Ontology TermGO:0000109: nucleotide-excision repair complex cellular_component
GO:0000715: nucleotide-excision repair, DNA damage recognition biological_process
GO:0006289: nucleotide-excision repair biological_process
AuthorLoftus BJ, Eisen JA
Entry DateOct 19 1999 6:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentAll proteins in this family for which functions are known are used for the recognition of DNA damage as part of nucleotide excision repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
ReferencesA2 hmmalign GA hmmsearch DR EGAD; 55115; DR SWISSPROT; P28519; RM 92158051;