HMM Summary Page: TIGR00584

Functionmismatch-specific thymine-DNA glycosylate (mug)
Trusted Cutoff402.60
Domain Trusted Cutoff402.60
Noise Cutoff41.55
Domain Noise Cutoff41.55
Isology Typesubfamily
EC Number3.2.2.-
HMM Length328
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
AuthorLoftus BJ, Eisen JA
Entry DateOct 19 1999 6:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentAll proteins in this family for whcih functions are known are G-T or G-U mismatch glycosylases that function in base excision repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Used 2pf model.
ReferencesA2 hmmalign GA hmmsearch DR SWISSPROT: P56581; RM 98361936;