HMM Summary Page: TIGR00569

Functioncyclin ccl1
Trusted Cutoff250.35
Domain Trusted Cutoff250.35
Noise Cutoff103.90
Domain Noise Cutoff103.90
Isology Typesubfamily
HMM Length305
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
AuthorLoftus BJ, Eisen JA
Entry DateOct 19 1999 6:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentAll proteins in this family for which functions are known are cyclins that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
ReferencesA2 hmmalign GA hmmsearch GA hmmsearch GA hmmsearch DR EGAD; 56516; DR SWISSPROT; P37366; RM 94047081;