HMM Summary Page: TIGR00568

Functionalkylated DNA repair protein AlkB
Gene SymbolalkB
Trusted Cutoff231.05
Domain Trusted Cutoff231.05
Noise Cutoff70.85
Domain Noise Cutoff70.85
Isology Typeequivalog
HMM Length173
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
Gene Ontology TermGO:0006281: DNA repair biological_process
AuthorLoftus BJ, Eisen JA
Entry DateOct 19 1999 6:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentProteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
ReferencesA2 hmmalign GA hmmsearch GA hmmsearch DR EGAD; 8017; DR SWISSPROT; P05050; RM 87057220;