HMM Summary Page: TIGR00529

Functionintegral membrane protein, TIGR00529 family
Trusted Cutoff378.40
Domain Trusted Cutoff378.40
Noise Cutoff108.15
Domain Noise Cutoff108.15
Isology Typehypoth_equivalog
HMM Length387
Mainrole CategoryHypothetical proteins
Subrole CategoryConserved
AuthorHaft DH
Entry DateOct 19 1999 4:08PM
Last ModifiedFeb 21 2012 11:59AM
CommentThis protein is predicted to have 10 transmembrane regions. Members of this family are found so far in the Archaea (Archaeoglobus fulgidus and Pyrococcus horikoshii) and in a bacterial thermophile, Thermotoga maritima. In Pyrococcus, the gene is located between nadA and nadB, two components of an enzyme involved in de novo synthesis of NAD. By PSI-BLAST, this family shows similarity (but not necessarily homology) to gluconate permease and other transport proteins.
ReferencesA2 hmmalign AL clustalw, seaview