HMM Summary Page: TIGR00416

FunctionDNA repair protein RadA
Gene SymbolradA
Trusted Cutoff403.05
Domain Trusted Cutoff403.05
Noise Cutoff297.40
Domain Noise Cutoff297.40
Isology Typeequivalog
HMM Length454
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
Gene Ontology TermGO:0005524: ATP binding molecular_function
GO:0006281: DNA repair biological_process
AuthorLoftus BJ
Entry DateApr 20 1999 2:09PM
Last ModifiedFeb 14 2011 3:27PM
CommentThe gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus (SP:P45266) and in Listeria monocytogenes (SP:Q48761) . for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
ReferencesA2 hmmalign DR ECOCYC; EG11296; DR Swissprot; P24554; DR Swissprot; Q48761; RL J. BACTERIOL. 178:5045-5048(1996) SE TIGR GA hmmls AL clustalw, belvu BD 0474