HMM Summary Page: TIGR00304

FunctionTIGR00304 family protein
Trusted Cutoff62.65
Domain Trusted Cutoff62.65
Noise Cutoff29.75
Domain Noise Cutoff29.75
Isology Typehypoth_equivalog
HMM Length84
Mainrole CategoryHypothetical proteins
Subrole CategoryConserved
AuthorLoftus BJ
Entry DateApr 20 1999 2:05PM
Last ModifiedFeb 14 2011 3:27PM
CommentThe member of this family from Pyrococcus horikoshii scores only 13.91 bits, largely because it is at least 15 residues shorter than other members of this family of small proteins and is penalized for not matching to the N-terminal section of the model. Cutoff scores are set so this hit is between noise and trusted cutoffs.
ReferencesA2 hmmalign SE TIGR GA hmmls AL clustalw