HMM Summary Page: TIGR00279

Functionribosomal protein uL16
Gene SymbolrplJ
Trusted Cutoff223.55
Domain Trusted Cutoff223.55
Noise Cutoff101.70
Domain Noise Cutoff101.70
Isology Typeequivalog
HMM Length172
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0015934: large ribosomal subunit cellular_component
GO:0022625: cytosolic large ribosomal subunit cellular_component
AuthorHaft DH
Entry DateApr 20 1999 2:04PM
Last ModifiedSep 4 2014 12:33PM
CommentThis model finds the archaeal and eukaryotic forms of ribosomal protein uL16, previously L10.e. The protein is encoded by multiple loci in some eukaryotes and has been assigned a number of extra-ribosomal functions, some of which will require re-evaluation in the context of identification as a ribosomal protein. L10.e is distantly related to eubacterial ribosomal protein L16.
ReferencesSE TIGR GA hmmls AL clustalw DR HAMAP; MF_00448; 21 of 42