| Accession | TIGR00166 |
| Name | S6 |
| Function | ribosomal protein bS6 |
| Gene Symbol | rpsF |
| Trusted Cutoff | 42.90 |
| Domain Trusted Cutoff | 42.90 |
| Noise Cutoff | 20.50 |
| Domain Noise Cutoff | 20.50 |
| Isology Type | equivalog |
| HMM Length | 95 |
| Mainrole Category | Protein synthesis |
| Subrole Category | Ribosomal proteins: synthesis and modification |
| Gene Ontology Term | GO:0000314: organellar small ribosomal subunit cellular_component |
| | GO:0003735: structural constituent of ribosome molecular_function |
| | GO:0006412: translation biological_process |
| | GO:0022627: cytosolic small ribosomal subunit cellular_component |
| Author | Haft DH |
| Entry Date | Apr 20 1999 2:04PM |
| Last Modified | Sep 4 2014 10:50AM |
| Comment | The ribosomal protein S6 ortholog family, including yeast MRP17, shows more than two-fold length variation from 95 residues in Bacillus subtilis to 215 in Mycoplasma pneumoniae. This length variation comes primarily from poorly conserved C-terminal extensions that are particularly long in the Mycoplasmas.
MRP17 protein is a component of the small ribosomal subunit in mitochondria, and is shown here to be an ortholog of S6. |
| References | SE TIGR
GA hmmls
AL clustalw, belvu, seaview
DR PROSITE; PDOC00805; RIBOSOMAL_S6
DR PFAM; PF01250; Ribosomal_S6
DR ECOCYC; EG10905; rpsF
DR HAMAP; MF_00360; 488 of 502 |
| Genome Property | GenProp0175: ribosome, bacterial, small subunit (HMM) |
| | GenProp0799: bacterial core gene set, exactly 1 per genome (HMM) |
