HMM Summary Page: TIGR00140

Functionhydrogenase expression/formation protein
Gene SymbolhybD
Trusted Cutoff151.80
Domain Trusted Cutoff151.80
Noise Cutoff103.10
Domain Noise Cutoff103.10
Isology Typeequivalog
EC Number3.4.23.-
HMM Length151
Mainrole CategoryProtein fate
Subrole CategoryProtein modification and repair
Gene Ontology TermGO:0004190: aspartic-type endopeptidase activity molecular_function
GO:0009375: ferredoxin hydrogenase complex cellular_component
GO:0051604: protein maturation biological_process
AuthorRichardson DL
Entry DateApr 20 1999 2:08PM
Last ModifiedFeb 14 2011 3:27PM
Commentvalid names: hupD, hynC, hoxM. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease.
ReferencesA2 hmmalign RM 93273705 RT Analysis of the periplasmic [NiFe] hydrogenase transcription unit from Desulfovibrio fructosovorans. RA Rousset M, Dermoun Z, Wall JD, Belaich JP RL J Bacteriol 1993 Jun;175(11):3388-93 SE TIGR GA hmmls AL clustalw BD build_dir/0188