HMM Summary Page: TIGR00092
| Accession | TIGR00092 |
| Name | TIGR00092 |
| Function | GTP-binding protein YchF |
| Gene Symbol | ychF |
| Trusted Cutoff | 279.20 |
| Domain Trusted Cutoff | 279.20 |
| Noise Cutoff | 203.55 |
| Domain Noise Cutoff | 203.55 |
| Isology Type | hypoth_equivalog |
| HMM Length | 368 |
| Mainrole Category | Unknown function |
| Subrole Category | General |
| Gene Ontology Term | GO:0005525: GTP binding molecular_function |
| Author | Richardson DL, Haft DH |
| Entry Date | Apr 20 1999 2:04PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This predicted GTP-binding protein is found in a single copy in every complete bacterial genome, and is found in Eukaryotes. A more distantly related protein, separated from this model, is found in the archaea. It is known to bind GTP and double-stranded nucleic acid. It is suggested to belong to a nucleoprotein complex and act as a translation factor. |
| References | RN [1] RM 12837776 RT Crystal structure of the YchF protein reveals binding sites for GTP and nucleic acid. RA Teplyakov A, Obmolova G, Chu SY, Toedt J, Eisenstein E, Howard AJ, Gilliland GL. RL J Bacteriol. 2003 Jul;185(14):4031-7. RN [2] RM 11200227 RT Comparative genomics of prokaryotic GTP-binding proteins (the Era, Obg, EngA, ThdF (TrmE), YchF and YihA families) and their relationship to eukaryotic GTP-binding proteins (the DRG, ARF, RAB, RAN, RAS and RHO families). RA Mittenhuber G. RL J Mol Microbiol Biotechnol 2001 Jan;3(1):21-35 |
| Genome Property | GenProp0799: bacterial core gene set, exactly 1 per genome (HMM) |