HMM Summary Page: TIGR00035

Functionaspartate racemase
Trusted Cutoff93.10
Domain Trusted Cutoff93.10
Noise Cutoff88.70
Domain Noise Cutoff88.70
Isology Typesubfamily
EC Number5.1.1.13
HMM Length236
Mainrole CategoryEnergy metabolism
Subrole CategoryAmino acids and amines
Gene Ontology TermGO:0006520: cellular amino acid metabolic process biological_process
GO:0047689: aspartate racemase activity molecular_function
AuthorHaft DH
Entry DateApr 20 1999 2:06PM
Last ModifiedFeb 14 2011 3:27PM
CommentAsparate racemases and some close homologs of unknown function are related to the more common glutamate racemases, but form a distinct evolutionary branch. This HMM identifies members of the aspartate racemase-related subset of amino acid racemases. Suggest hmmls for identification of probable aspartate racemases, hmmsw for general homologs.
ReferencesA2 hmmalign DR EC SE TIGR GA hmmsw